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2006
Haplogroup C is a small Eastern Asian and American group
Here are the examples of sequences for this haplogroup:
1. Ingman A8.JS AF346970(Buriat)
2. Ingman A17.JS AF346579(Evenki)
2a Ingman A29.JS AF346991(Khirgiz)
4. Ingman A51.JS AF347013(Warao)
5. Kong A42.JS AY255174(Chinese)
5a Kong AY255176(Chinese)
7. Mishmar A9.JS AY195753(Evenki)
8. Mishmar A15.JS AY195759(N American)
9. Mishmar A19.JS AY195763(Koryak)
10 Mishmar AY195772.2
A73G T146C A249- A263G 309.1C 315.1C T489C A750G A1438G 2232.1A A2706G T3552A
A3816G A4715G A4769G G6026A C7028T C7196A G8251A G8584A A8701G A8860G T9540C
A9545G A10398G C10400T T10873C G11719A G11914A G11969A C12705T A13263G
T14318C C14766T T14783C G15043A T15204C G15301A A15326G
A15487T C16223T T16298C C16327T
11. Starik. A2.JS AY519485(Evenki)
12. Starik. A4.JS AY519487(Koriak)
13. Starik. A7.JS AY519490(Nganasan)
14. Starik. A13.JS AY519496(Ulchi)
15. Starik. A17.JS AY570526(Tuvli)
16. Starik. A18.JS AY615359(Nganasan)
17. Starik. A19.JS AY615360(Tofalar)
18. Starik. A20.JS AY615361(Ul'chi)
19. Tanaka (1)A43.JS HNsq0177(Japanese)
20. Tanaka (11)A39.JS TCsq0052(Japanese)
21. Herrnstadt A2.JS mtDNA46(Asia) CODING AREA ONLY
22. Herrnstadt A7.JS mtDNA145(Asia) CODING AREA ONLY
23. Herrnstadt A12.JS mtDNA174(Asia) CODING AREA ONLY
24. Herrnstadt A14.JS EF657317 mtDNA177(Asia) CODING AREA ONLY
25. Herrnstadt A17.JS EF657324 mtDNA183(Asia) CODING AREA ONLY
26. Herrnstadt A20.JS EF657329 mtDNA188(Asia) CODING AREA ONLY
27. Herrnstadt A28.JS EF657355 mtDNA210(Asia) CODING AREA ONLY
28. Herrnstadt A44.JS EF657504 mtDNA345(Asia) CODING AREA ONLY
29. Herrnstadt A54.JS EF657547 mtDNA384(Asia) CODING AREA ONLY
30. Herrnstadt A58.JS EF657584 mtDNA417(Asia) CODING AREA ONLY
31. Herrnstadt A61.JS EF657588 mtDNA420(Asia) CODING AREA ONLY
32. Herrnstadt A67.JS EF657639 mtDNA467(Asia) CODING AREA ONLY
33. Kivisild (2)A32.JS DQ112787(Asia) CODING AREA ONLY
34. Kivisild (2)A34.JS DQ112589(America) CODING AREA ONLY
34a Kivisild DQ112846.2(America) CODING AREA ONLY
35. Kivisild (3)A33.JS DQ112858(Asia) CODING AREA ONLY
36. Kivisild (3)A63.JS DQ112888(America) CODING AREA ONLY
37. Kong_2006 DQ272118
38. Kong_2006 DQ272122
39. L1 DQ462234
Derenko EF153779
Wang EF429136-38
Ingman_gyll EU007839
7850
7858
7875
7879
Tamm EU095527
5537
5543
5544
5549
The sequences has these differences from the CRS:
- for the main stem leading from H:
73 263 750 1438 2706 4769 7028 8701
8860 9540 10398 10873 11719 12705 14766 15301
15326 16223
- and for the M* branch:
489 10400 14783 15043
- and for haplogroups C, Z, & M8:
4715 7196 8584 15487 16298
- and for C:
249d 3552 9545 11914 13263 14318 16327
- the variable 16519 and changes at 309-315
the mutation list is:
1. Ingman A8.JS AF346970(Buriat)
2232.A A3816G G6026A C9248T G11969A T15204C T16249C C16291T
2. Ingman A17.JS AF3546579(Evenki)
2232.A G6026A A8014G G8485A T8793C A9263G G11969A A12672G T13818C
T15204C A16171G C16344T T16357C
2a Ingman A29.JS AF346991(Khirgiz)
T146C 2232.A A3816G G6026A G8251A G8764A G11969A T15204C
4. Ingman A51.JS AF347013(Warao)
C194T A200G A290. A291. C522. A523. G3010A G7697A G9591A
A16051G T16189C 16193.C 16193.C T16325C G16438A
5. Kong A42.JS AY255174(Chinese)
T195C C1715T 2232.A G6026A T7999C G10685A A10891G G11969A A12672G
T15204C T15968C G16129A
5a. Kong AY255176(Chinese)
A73G T146C A249- A263G 309.1C 309.2C 315.1C T489C A750G A1438G G1719A
A2706G T3552A T4047C A4715G A4769G G5821A C5987T A6338G C7028T C7196A
G7853A C7982T G8584A A8701G A8860G T9540C A9545G A10398G C10400T T10873C
G11719A G11914A C12705T T12957C A13263G T14318C C14766T T14783C A14978G
G15043A G15301A A15326G A15487T G15930A T16217C C16223T T16298C T16311C
C16327T
7. Mishmar A9.JS AY195753(Evenki)
T195C C1715T 2232.A T3644C C5606T G6026A T7999C A8389G C11476T
G11969A A12672G T15204C A15607G T15968C G16129A
8. Mishmar A15.JS AY195759(N American)
A290. A291. A493G C522. A523. T5493C G6962A T8555C A10151G
T11147C T16325C
9. Mishmar A19.JS AY195763(Koryak)
2232.A A3816G G6026A G11969A T15204C T16124C A16318T
10. Mishmar AY195772.2
A73G T146C A249- A263G 309.1C 315.1C T489C A750G A1438G 2232.1A A2706G T3552A
A3816G A4715G A4769G G6026A C7028T C7196A G8251A G8584A A8701G A8860G T9540C
A9545G A10398G C10400T T10873C G11719A G11914A G11969A C12705T A13263G
T14318C C14766T T14783C G15043A T15204C G15301A A15326G
A15487T C16223T T16298C C16327T
11. Starik A2.JS AY519485(Evenki) (249A 489T 12705C)
G6026A G11969A C12750T T15204C A16171G C16344T T16357C
12. Starik. A4.JS AY519487(Koriak) (249A 489T 12705C)
A3816G G6026A G11969A C12750T T15204C T16124C A16318T
13. Starik. A7.JS AY519490(Nganasan) (249A 489T 12705C)
A3816G C3992N G6026A T11254C G11969A C12750T T15204C T16093C
14. Starik. A13.JS AY519496(Ulchi) (249A 489T 12705C)
A290. A291. T3826C G7598A C12750T T16325C T16356C
15. Starik. A17.JS AY570526(Tuvli)
T146C T710C 2232.A A3816G G6026A G8251A G11969A A14793G T15204C
16259.A
16. Starik. A18.JS AY615359(Nganasan)
595. 1718.A A3397G T9233C C16148T T16288C
17. Starik. A19.JS AY615360(Tofalar)
T195C A234G C1715T 2232.A G6026A T7999C A8389G C11476T G11969A
A12672G T15204C A15607G T15968C T16093C G16129A A16235G G16390A
18. Starik. A20.JS AY615361(Ul'chi) (16327)
595.C G3591A T4216C C4904T C8140T C16261T T16288C
19. Tanaka (1)A43.JS HNsq0177(Japanese)
573.C 573.C 573.C 573.C 573.C 573.C 595. A4562G G9489A
T16093C T16288C
20. Tanaka (11)A39.JS TCsq0052(Japanese)
A93G A290. A291. C522. A523. T2887C T3826C G7598A C9099A
T9750C G13590A G15773A T16093C C16192T T16325C T16356C
21. Herrnstadt A2.JS mtDNA46(Asia)
595.C C7694T T10454C
22. Herrnstadt A7.JS mtDNA145(Asia)
C4242T G7013A C9557T G12454A
23. Herrnstadt A12.JS mtDNA174(Asia)
A5894G G6261A C7985G A10397G G13813A T14215C
24. Herrnstadt A14.JS mtDNA177(Asia)
G1888A C10853T C12092T T12414C T15670C G15930A
25. Herrnstadt A17.JS mtDNA183(Asia)
G1888A A12642G A12978G G15930A
26. Herrnstadt A20.JS mtDNA188(Asia)
G1888A A12642G A12978G G15930A
27. Herrnstadt A28.JS mtDNA210(Asia)
G1888A T2486C A4315T G12372A A14769G G15077A G15119A G15930A
28. Herrnstadt A44.JS mtDNA345(Asia)
G7697A T15670C
29. Herrnstadt A54.JS mtDNA384(Asia)
G1888A T11617C G13359A G15930A
30. Herrnstadt A58.JS mtDNA417(Asia)
T11147C
31. Herrnstadt A61.JS mtDNA420(Asia)
G1888A G2735A A12978G G15930A
32. Herrnstadt A67.JS mtDNA467(Asia)
597.C A1670T C7694T T10454C
33. Kivisild (2)A32.JS DQ112787(Asia)
595.C C3797G T7861C A10682G G11902A G13968A A15080G
G15930A
34. Kivisild (2)A34.JS DQ112589(America)
G1719A G7697A G12501A G15106A
34a Kivisild DQ112846.2(America) CODING AREA ONLY
T489C A493G C522- A523- A750G A1438G G1719A A2706G T3552A A4715G A4769G
C7028T C7196A G7337A G8584A A8701G A8860G T9540C A9545G T10084C A10398G
C10400T T10873C G11447A G11719A G11914A C12705T A13263G T14318C C14766T
T14783C G15043A G15301A A15326G A15487T
35. Kivisild (3)A33.JS DQ112858(Asia)
2232.A G5821A A6338G G7853A A10754G T11839C
36. Kivisild (3)A63.JS DQ112888(America)
C522. A523. G1888A G12618A A13321G T13879C T14581C
T15313C G15930A
37. Kong_2006 DQ272118
A73G A249- A263G 315.1C T489C 595.1C A750G A1438G A2706G T3552A G3591A A4715G
A4769G C4904T C7028T C7196A C8140T G8584A A8701G A8860G A9007G T9540C A9545G
A10398G C10400T T10873C G11719A G11914A C12705T A13263G T14318C C14766T T14783C
G15043A G15301A A15326G A15487T C16223T C16261T T16288C T16298C
38. Kong_2006 DQ272122
A73G T146C A249- A263G 309.1C 315.1C T489C T710C A750G A1438G 2232.1A A2706G
T3552A A3816G A4231G A4715G A4769G G6026A T6221C C7028T C7196A G8251A G8584A
A8701G A8860G T9540C A9545G A10398G C10400T T10873C G11719A G11914A G11969A
C12705T A13263G G13928C T14318C C14766T T14783C G15043A T15204C G15301A A15326G
A15487T C16223T 16259.1A T16298C C16327T
39. Li A10.JS DQ462234(China)
A73G T195C A249. A263G 309.C 315.C T489C A750G A1438G 2232.A
A2706G T3552A A3816G A4769G T5095C G6026A C7028T G7702A G8027A G8584A
A8701G A8860G T9540C A9545G T10410C T10873C C11215T G11719A C12705T A13263G
T14318C C14766T T14783C T15204C G15301A A15326G A15487T C16072T C16223T C16292T
T16298C C16327T