'Greasemonkey' and the mtDNA 'ONLINE ANALYSER'

Revised February 2009

It is now possible to 'analyse' each GenBank sequence in real time!
So no more worries about transcription errors or using outdated sequences.
However this only works with FIREFOX (sorry to all Internet Explorer users)

1. Load the 'Greasemonkey' tool
and the little smiling monkey will appear.

2. Fetch the 'user script', by entering:
www.ianlogan.co.uk/scripts/analyser.user.js
and pressing 'INSTALL' when requested.

3. Now enter www.ianlogan.co.uk/scripts/display.htm
which will give the mutation list for any GenBank sequence.

4. Select a sequence by entering its Accession number
and then clicking FETCH.
For each sequence choose between either:
The MAIN PAGE or the Mutation List.

A list of Accession Numbers can be found at
www.ianlogan.co.uk/haplogroup/instructs.htm#accession

5. The 'user script' does need to be updated whenever new sequences appear.
Do this by re-entering www.ianlogan.co.uk/scripts/analyser.user.js at any time.

If updating does not appear to work and you do not get the latest database
- try Tools, Options, clear private data - and then try updating again.
(I do not know why this should need doing - but it seems the solution.)

- - - - - - - - - -

Release history:

All releases may have little changes to haplogroups, etc.

9 Apr. 2009. 5,608 GenBank sequences
FTDNA - 5 sequences Haplogroups K, T, U, V
2 Apr. 2009. 5,603 GenBank sequences
Behar - 1 sequence Haplogroups A1
1 Apr. 2009. 5,602 GenBank sequences
Malyarchuk - 5 sequences Haplogroups HV, V
FTDNA - 4 sequences Haplogroups H1, H2, U2e, U5b1b
24 Mar. 2009. 5,593 GenBank sequences
FTDNA - 3 sequences Haplogroups H1, W, X
23 Mar. 2009. 5,590 GenBank sequences
Ennafaa - 6 sequences Haplogroups H1, H5
Bhat - 1 sequence removed awaiting revision.
18 Mar. 2009. 5,585 GenBank sequences
FTDNA - 3 sequences Haplogroups H1, H2, H5
17 Mar. 2009. 5,582 GenBank sequences
FTDNA - 4 sequences Haplogroups A2, H*, H3, L2
2 Mar. 2009. 5,578 GenBank sequences
FTDNA - 1 sequence Haplogroup C5
1 Mar. 2009. 5,577 GenBank sequences
Rogaev - 4 sequences Haplogroups H1 & T2 - Russian Imperial Family
19 Feb. 2009. 5,573 GenBank sequences
FTDNA - 9 sequences Haplogroups A, H, U3b
Argus - 1 sequence Haplogroup L1c1d
10 Feb. 2009. 5,563 GenBank sequences
FTDNA - 2 sequences Haplogroups H6*, U5b2
Malyarchuk - 1 sequence Haplogroup U2d
3 Feb. 2009. 5,560 GenBank sequences
Brisighelli - 9 sequences Haplogroup U7a2a
30 Jan. 2009. 5,551 GenBank sequences
Ueno - 90 sequences Japanese haplogroups
FTDNA - 2 sequences Haplogroups J, K
21 Jan. 2009. 5,459 GenBank sequences
Perego - 55 sequences Haplogroups D, X
16 Jan. 2009. 5,404 GenBank sequences
Nohira - 14 sequences Haplogroups A, B, D, F, G, N9, M7, M11
15 Jan. 2009. 5,390 GenBank sequences
FTDNA - 3 sequences Haplogroups J, K
4 Jan. 2009. 5,387 GenBank sequences
Costa - 43 sequences Haplogroups H, HV, I, J, N1, K, L, R, T, U, X
3 Jan. 2009. 5,344 GenBank sequences
Kujanova - 35 sequences Haplogroups H4, HV, L, M1, T, U3b, X
Dancause - 2 sequences Haplogroups M21, M46
2008: 31 Dec. 2008. 5,307 GenBank sequences
FTDNA - 3 sequences Haplogroups H11, H13, T2b
26 Dec. 2008. 5,304 GenBank sequences
FTDNA - 3 sequences Haplogroups J, W
Ji - 15 sequences Haplogroups F,G, M7, M8
15 Dec. 2008. 5,286 GenBank sequences
Pello - 10 sequences Haplogroups H, J, K, T, U
12 Dec. 2008. 5,276 GenBank sequences
FTDNA - 9 sequences Haplogroups H, J, K, T, U, V
1 Dec. 2008. 5,267 GenBank sequences
FTDNA - 3 sequences Haplogroup W
Irene - 75 sequences - European haplogroups 23 Nov. 2008. 5,189 GenBank sequences
FTDNA - 6 sequences Haplogroups H, J1, W, X2
21 Nov. 2008. 5,183 GenBank sequences
FTDNA - 7 sequences Haplogroups D, H, HV, J, X2
Trejaut - 2 sequences Haplogroup E
2 Nov. 2008. 5,174 GenBank sequences
Malyarchuk - 8 sequences Haplogroup L, M1
29 Oct. 2008. 5,166 GenBank sequences
Ermini - 1 sequence Haplogroup K1 - 'OTZI'
FTDNA - 1 sequence Haplogroup J2b
28 Oct. 2008. 5,164 GenBank sequences
Fendt - 10 sequences Haplogroups H5, H15, T2b, V, W1
24 Oct. 2008. 5,154 GenBank sequences
Zhang - 1 sequence Haplogroup G2b
21 Oct. 2008. 5,153 GenBank sequences
FTDNA - 1 sequence Haplogroup H3
Volodko - 1 sequence Haplogroup U4 15 Oct. 2008. 5,151 GenBank sequences
Bhat - 21 sequences - Indian haplogroups
FTDNA - 9 sequences Haplogroups H, I, J, K, L, T, U
7 Oct. 2008. 5,121 GenBank sequences
FTDNA - 3 sequences Haplogroups H, HV
18 Sep. 2008. 5,118 GenBank sequences
FTDNA - 4 sequences Haplogroups H, J
Amati-Bonneau - 1 sequence Haplogroup J
11 Sep. 2008. 5,113 GenBank sequences
FTDNA - 2 sequences Haplogroup H
27 Aug. 2008. 5,111 GenBank sequences
FTDNA - 2 sequences Haplogroups H, X2
Chaubey - 35 sequences Haplogroup R
22 Aug. 2008. 5,074 GenBank sequences
Wang - 3 sequences Haplogroup G
14 Aug. 2008. 5,071 GenBank sequences
Kumar - 72 sequences Haplogroup M2
12 Aug. 2008. 4,999 GenBank sequences
FTDNA - 5 sequences Haplogroup H, J, T
9 Aug. 2008 NEANDERTAL SEQUENCE - AM948965
6 Aug. 2008. 4,994 GenBank sequences
FTDNA - 3 sequences Haplogroup K, U
3 Aug. 2008. 4,991 GenBank sequences
FTDNA - 2 sequences Haplogroup H
27 Jul. 2008. 4,989 GenBank sequences
FTDNA - 2 sequences Haplogroup K
23 Jul. 2008. 4,987 GenBank sequences
FTDNA - 2 sequences Haplogroups I, T1
22 Jul. 2008. 4,985 GenBank sequences
Grzybowski - 51 sequences Haplogroups HV, R1, U4
9 Jul. 2008. 4,934 GenBank sequences
FTDNA - 3 sequences Haplogroups J, K
3 Jul. 2008. 4,931 GenBank sequences
FTDNA - 2 sequences Haplogroups K
2 Jul. 2008. 4,929 GenBank sequences
FTDNA - 2 sequences Haplogroups H, K
Feder - 16 sequences Haplogroup N1b
Starkovskaya -2 sequences Haplogroups C, D
27 Jun. 2008. 4,909 GenBank sequences.
FTDNA - 4 sequences Haplogroups H
Brown - 2 sequence Haplogroup J2b, U3
14 Jun. 2008. 4,903 GenBank sequences.
FTDNA - 5 sequences Haplogroups H, K, U
Derbeneva - 1 sequence Haplogroup N2
4 Jun. 2008. 4,897 GenBank sequences.
FTDNA - 6 sequences Haplogroups H, I, T2, W
1 Jun. 2008. 4,891 GenBank sequences.
Kazuno - 57 sequences - Japanese Haplogroups
31 May. 2008. 4,834 GenBank sequences.
Gilbert - 15 sequences Haplogroups A, D
27 May. 2008. 4,819 GenBank sequences.
Behar - 309 sequences Haplogroup L
FTDNA - 13 sequences Haplogroups H, J, K, T
21 May. 2008. 4,497 GenBank sequences.
Shlush - 53 sequences Haplogroups H, K, X
FTDNA & Argus - 12 sequences H, I, K, T U
15 May. 2008. 4,432 GenBank sequences.
Volodko - 84 sequences Haplogroups A, B, C, D
5 May. 2008. 4,348 GenBank sequences.
FTDNA - 9 sequences Haplogroups H, K, X2c
1 May. 2008. 4,339 GenBank sequences.
Derbeneva - 38 sequences Haplogroup D2, D3
FTDNA - 5 sequences Haplogroups H, K
24 Apr. 2008. 4,296 GenBank sequences.
Behar - 49 sequences - MANY HAPLOGROUPS
23 Apr. 2008. 4,247 GenBank sequences.
FTDNA - 3 sequences Haplogroups H, K
17 Apr. 2008. 4,244 GenBank sequences.
FTDNA - 7 sequences Haplogroups C, J, K, U
14 Apr. 2008. 4,237 GenBank sequences.
Hartmann - 95 sequences - A WORLDWIDE SELECTION
12 Apr. 2008. 4,142 GenBank sequences.
Rabadan - 112 sequences Haplogroups A, B, D, F, G, M, N
28 Mar. 2008. 4,030 GenBank sequences.
Abu-Amero - 7 sequences Haplogroup M
27 Mar. 2008. 4,023 GenBank sequences.
FTDNA - 7 sequences Haplogroups H, I, K, L, V
Maasz - 1 sequence Haplogroup U4b
20 Mar. 2008. 4,015 GenBank sequences.
FTDNA - 3 sequences Haplogroups H, HV*, W
19 Mar. 2008. 4,012 GenBank sequences.
Achilli - 11 sequences Haplogroups A, B, C, D, X
17 Mar. 2008. 4,001 GenBank sequences.
FTDNA - 3 sequences Haplogroups H, J, L
9 Mar. 2008. 3,998 GenBank sequences.
Malyarchuk - 5 sequences Haplogroups J, M
8 Mar. 2008. 3,993 GenBank sequences.
Fagundes - 58 sequences Haplogroups A, B, C, D, X
6 Mar. 2008. 3,935 GenBank sequences.
FTDNA - 5 sequences Haplogroups G, K, U, W
27 Feb. 2008. 3,930 GenBank sequences.
FTDNA - 3 sequences Haplogroups T, U
22 Feb. 2008. 3,927 GenBank sequences.
FTDNA - 2 sequences Haplogroup H2a2
11 Feb. 2008. 3,925 GenBank sequences.
Quintana-Murci - 25 sequence Haplogroup L1c
6 Feb. 2008. 3,900 GenBank sequences.
FTDNA - 3 sequences Haplogroup D, H, U
3 Feb. 2008. 3,897 GenBank sequences.
FTDNA - 1 sequence Haplogroup W
23 Jan. 2008. 3,896 GenBank sequences.
Grzybowski - 22 sequences Haplogroups H, R1 & U
23 Jan. 2008. 3,874 GenBank sequences.
FTDNA - 10 sequences Haplogroups H,K,T,U,X
2 Jan. 2008. 3,864 GenBank sequences.
Rao - 2 sequences Haplogroup M31
2007: 26 Dec. 2007. 3,862 GenBank sequences.
FTDNA - 2 sequences Haplogroups B, K
18 Dec. 2007. 3,860 GenBank sequences.
FTDNA - 8 sequences Haplogroups C, H, K, U
6 Dec. 2007. 3,852 GenBank sequences.
FTDNA - 9 sequences Haplogroups H, J, K, M, V
17 Nov. 2007. 3,843 GenBank sequences.
FTDNA - 9 sequences Haplogroups H, K, T, U, W
1 Nov. 2007. 3,834 GenBank sequences.
Wang - 29 sequences Haplogroups A, B, C, D, F, R9b
Bravi - 4 sequences Haplogroups A, B, C, D
La Morgia - 2 sequences Haplogroups T, U
31 Oct. 2007. 3,799 GenBank sequences.
FTDNA - 3 sequences Haplogroups M, K, U
30 Oct. 2007. 3,796 GenBank sequences.
FTDNA - 5 sequences Haplogroups H, K
27 Oct. 2007. 3,791 GenBank sequences.
FTDNA - 5 sequences Haplogroups H, U
17 Oct. 2007. 3,786 GenBank sequences.
Derenko - A(27),C(1),D(6),G(9),I(1),J(2),M(11),N(6),X(4),Y(4)
13 Oct. 2007. 3,715 GenBank sequences.
FTDNA - 4 sequences Haplogroups H, K, U
25 Sep. 2007. 3,711 GenBank sequences.
FTDNA - 5 sequences Haplogroups H, J, K
20 Sep. 2007. 3,706 GenBank sequences.
FTDNA - 5 sequences Haplogroups H, U & M33.
19 Sep. 2007. 3,701 GenBank sequences.
Hinttala - 28 mixed European sequences.
18 Sep. 2007. 3,673 GenBank sequences.
FTDNA - 4 Haplogroup U sequences.
13 Sep. 2007. 3,669 GenBank sequences.
FTDNA - 10 mixed European sequences.
12 Sep. 2007. 3,659 GenBank sequences.
Tamm - EU095526-EU095552 - Haplogroups A, B, C , D
1 Sep. 2007. 3,632 GenBank sequences.
FTDNA - EU091245 (I)
24 Aug. 2007. 3,631 GenBank sequences.
Annunen & Rasila - AM260558-AM260634 - 77 mixed European sequences
22 Aug. 2007. 3,554 GenBank sequences.
Arnason - AM711903 (L0a2b), AM711904 (L0d)
21 Aug. 2007. 3,552 GenBank sequences.
FTDNA - EU086510 (W), EF089746 (K1a3a), EU089747 (H1)
15 Aug. 2007. 3,549 GenBank sequences.
FTDNA - EU080974 (H1)
10 Aug. 2007. 3,548 GenBank sequences.
FTDNA - EU057183 (U3a), EU073969 (K1), EU073970 (J1), EU073971(H10), EU074158 (H1)
4 Aug. 2007. 3,543 GenBank sequences.
FTDNA - EU049814 (U5a), EU051827(H4a), EU052289(H13), EU052292(K1a1b1a)
Ingman & Gyllensten - EU007835-EU007895
20 July 2007. 3,478 GenBank sequences.
Herrnstadt - EF657231-EF65790
17 July 2007. 2,918 GenBank & 560 'Herrnstadt' sequences.
10 July 2007. 2,910 GenBank & 560 'Herrnstadt' sequences.
(NB. 28 sequences in the range EF660912-EF661113 (Gasparre) are incomplete)
7 July 2007. 2,808 GenBank & 560 'Herrnstadt' sequences.
19 June 2007. 2,807 GenBank & 560 'Herrnstadt' sequences.
6 June 2007. One sequence revised.
28 May 2007. 2,803 GenBank & 560 'Herrnstadt' sequences.
14 May 2007. 2,799 GenBank & 560 'Herrnstadt' sequences.
10 May 2007. 2,798 GenBank & 560 'Herrnstadt' sequences.
22 April 2007. 2,788 Genbank & 560 'Herrnstadt' sequences.
17 April 2007. 2,726 GenBank & 560 'Herrnstadt' sequences.
6 April 2007. 2,722 GenBank & 560 'Herrnstadt' sequences.
(NB. The 'Herrnstadt' sequences are 'coding area only')
3 April 2007. 2,722 sequences.
29 March 2007. 2,721 sequences.
21 March 2007. 2,718 sequences.
19 March 2007. Initial release. 2,717 sequences.

Click here to contact Ian Logan.

2009